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SANvi

Fitting Shared Atoms Nested Models via Variational Bayes

v0.1.1 · May 15, 2024 · MIT + file LICENSE

Description

An efficient tool for fitting the nested common and shared atoms models using variational Bayes approximate inference for fast computation. Specifically, the package implements the common atoms model (Denti et al., 2023), its finite version (D'Angelo et al., 2023), and a hybrid finite-infinite model. All models use Gaussian mixtures with a normal-inverse-gamma prior distribution on the parameters. Additional functions are provided to help analyze the results of the fitting procedure. References: Denti, Camerlenghi, Guindani, Mira (2023) <doi:10.1080/01621459.2021.1933499>, D’Angelo, Canale, Yu, Guindani (2023) <doi:10.1111/biom.13626>.

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CRAN Check Status

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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.1Mb
  sub-directories of 1Mb or more:
    libs   5.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.3Mb
  sub-directories of 1Mb or more:
    libs   5.7Mb
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/SANvi.Rcheck/00install.out' for details.
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.1Mb
  sub-directories of 1Mb or more:
    libs   5.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.3Mb
  sub-directories of 1Mb or more:
    libs   5.7Mb
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.1Mb
  sub-directories of 1Mb or more:
    libs   5.6Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.3Mb
  sub-directories of 1Mb or more:
    libs   5.7Mb

Dependency Network

Dependencies Reverse dependencies scales RColorBrewer Rcpp matrixStats SANvi

Version History

3 tracked
new 0.1.1 Mar 10, 2026
updated 0.1.1 ← 0.1.0 diff May 14, 2024
new 0.1.0 Oct 9, 2023