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RaMS

R Access to Mass-Spec Data

v1.4.3 · Oct 8, 2024 · MIT + file LICENSE

Description

R-based access to mass-spectrometry (MS) data. While many packages exist to process MS data, many of these make it difficult to access the underlying mass-to-charge ratio (m/z), intensity, and retention time of the files themselves. This package is designed to format MS data in a tidy fashion and allows the user perform the plotting and analysis.

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CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

re-building of vignette outputs

Error(s) in re-building vignettes:
  ...
--- re-building ‘Intro-to-RaMS.Rmd’ using rmarkdown

Quitting from Intro-to-RaMS.Rmd:106-109 [plotBPC]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error
...[truncated]...
friends.Rmd’

--- re-building ‘speed_size_comparison.Rmd’ using rmarkdown
--- finished re-building ‘speed_size_comparison.Rmd’

SUMMARY: processing the following file failed:
  ‘Intro-to-RaMS.Rmd’

Error: Vignette re-building failed.
Execution halted
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (4)

Dependency Network

Dependencies Reverse dependencies xml2 base64enc data.table PKbioanalysis RawHummus chromConverter mums2 RaMS

Version History

7 tracked
new 1.4.3 Mar 10, 2026
updated 1.4.3 ← 1.4.0 diff Oct 8, 2024
updated 1.4.0 ← 1.3.4 diff Mar 1, 2024
updated 1.3.4 ← 1.3.1 diff Dec 12, 2023
updated 1.3.1 ← 1.3.0 diff Dec 13, 2022
updated 1.3.0 ← 1.0.0 diff Nov 27, 2022
new 1.0.0 Mar 21, 2021