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PreProcess

Basic Functions for Pre-Processing Microarrays

v3.1.9 · Apr 6, 2025 · Apache License (== 2.0)

Description

Provides classes to pre-process microarray gene expression data as part of the OOMPA collection of packages described at <http://oompa.r-forge.r-project.org/>.

Downloads

CRAN

351

Last 30 days

12552nd

831

Last 90 days

3K

Last year

Trend: +54% (30d vs prior 30d)

r2u CRAN

0

Last 30 days

26

Last 90 days

103

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

7

Last 7 days

19

Last 30 days

1

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

2,296

Files

37

Compiled share

0%

Has compiled src

No

Language breakdown

R 635 (27.7%)Tests 508 (22.1%)Docs 962 (41.9%)Vignettes 191 (8.3%)

API

Exported functions

29

Internal functions

1

Recent export changes

v3.1.4+29 fliplr, flipud, ellipse +26 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.80

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

87.5%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

25%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.4

System requirements

C++ standard

License

Apache License (== 2.0)

License flags

not SPDX, not OSI

History

Versions

5

First release

2017-07-13

Latest release

2025-04-06

Avg cadence

325 days

Cold removal rate

Dep drift

0

LOC over versions

v3.1.4: 2,395 LOCv3.1.5: 2,395 LOCv3.1.6: 2,404 LOCv3.1.7: 2,404 LOCv3.1.9: 2,296 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies oompaBase PreProcess

Version History

6 tracked
new 3.1.9 Mar 10, 2026
updated 3.1.9 ← 3.1.7 diff Apr 6, 2025
updated 3.1.7 ← 3.1.6 diff May 5, 2019
updated 3.1.6 ← 3.1.5 diff Apr 22, 2019
updated 3.1.5 ← 3.1.4 diff May 16, 2018
new 3.1.4 Jul 12, 2017