POD
Probability of Detection for Qualitative PCR Methods
v1.2.0
·
Jun 30, 2020
·
GPL-3
Description
This tool computes the probability of detection (POD) curve and the limit of detection (LOD), i.e. the number of copies of the target DNA sequence required to ensure a 95 % probability of detection (LOD95). Other quantiles of the LOD can be specified. This is a reimplementation of the mathematical-statistical modelling of the validation of qualitative polymerase chain reaction (PCR) methods within a single laboratory as provided by the commercial tool 'PROLab' <http://quodata.de/>. The modelling itself has been described by Uhlig et al. (2015) <doi:10.1007/s00769-015-1112-9>.
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CRAN Check Status
2
ERROR
2
NOTE
9
OK
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | ERROR |
| r-oldrel-macos-x86_64 | ERROR |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (4 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Markus Boenn <markus.boenn.sf@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Markus",
family = "Boenn",
role = c("aut", "cre"),
email = "markus.boenn.sf@gmail.com",
comment = "State Office for Consumer Protection Saxony-Anhalt, Germany")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Markus Boenn <markus.boenn.sf@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Markus",
family = "Boenn",
role = c("aut", "cre"),
email = "markus.boenn.sf@gmail.com",
comment = "State Office for Consumer Protection Saxony-Anhalt, Germany")
as necessary.
ERROR
r-oldrel-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘howto.excel.Rmd’ using knitr
Error: processing vignette 'howto.excel.Rmd' failed with diagnostics:
9:48: unexpected symbol
8: person(family = "Simon", given = c("Kirsten")),
9: person(family = "M{\\{}{\\backslash}"a
^
--- failed re-building ‘howto.excel.Rmd’
SUMMARY: processing the following file failed:
‘howto.excel.Rmd’
Error: Vignette re-building failed.
Execution halted
ERROR
r-oldrel-macos-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘howto.excel.Rmd’ using knitr
Error: processing vignette 'howto.excel.Rmd' failed with diagnostics:
9:48: unexpected symbol
8: person(family = "Simon", given = c("Kirsten")),
9: person(family = "M{\\{}{\\backslash}"a
^
--- failed re-building ‘howto.excel.Rmd’
SUMMARY: processing the following file failed:
‘howto.excel.Rmd’
Error: Vignette re-building failed.
Execution halted
Check History
ERROR 7 OK · 5 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Markus Boenn <markus.boenn.sf@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Markus",
family = "Boenn",
role = c("aut", "cre"),
email = "markus.boenn.sf@gmail.com",
comment = "State Office for Consumer Protection Saxony-Anhalt, Germany")
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Markus Boenn <markus.boenn.sf@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = "Markus",
family = "Boenn",
role = c("aut", "cre"),
email = "markus.boenn.sf@gmail.com",
comment = "State Office for Consumer Protection Saxony-Anhalt, Germany")
as necessary.
ERROR
r-release-macos-arm64
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘howto.excel.Rmd’ using knitr
Error: processing vignette 'howto.excel.Rmd' failed with diagnostics:
9:48: unexpected symbol
8: person(family = "Simon", given = c("Kirsten")),
9: p
...[truncated]...
son(family = "M{\\{}{\\backslash}"a
^
--- failed re-building ‘howto.excel.Rmd’
SUMMARY: processing the following file failed:
‘howto.excel.Rmd’
Error: Vignette re-building failed.
Execution halted
ERROR
r-release-macos-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes:
--- re-building ‘howto.excel.Rmd’ using knitr
Error: processing vignette 'howto.excel.Rmd' failed with diagnostics:
9:48: unexpected symbol
8: person(family = "Simon", given = c("Kirsten")),
9: p
...[truncated]...
son(family = "M{\\{}{\\backslash}"a
^
--- failed re-building ‘howto.excel.Rmd’
SUMMARY: processing the following file failed:
‘howto.excel.Rmd’
Error: Vignette re-building failed.
Execution halted
NOTE
r-oldrel-macos-arm64
LazyData
'LazyData' is specified without a 'data' directory
NOTE
r-oldrel-macos-x86_64
LazyData
'LazyData' is specified without a 'data' directory
NOTE
r-oldrel-windows-x86_64
LazyData
'LazyData' is specified without a 'data' directory