OmnibusFisher

A Modified Fisher’s Method to Test Overall Gene-Level Effect

v1.0 · Dec 19, 2018 · GPL (>= 2)

Description

The separate p-values of SNPs, RNA expressions and DNA methylations are calculated by KM regression. The correlation between different omics data are taken into account. This method can be applied to either samples with all three types of omics data or samples with two types.

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r-devel-windows-x86_64	OK	89s
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r-patched-linux-x86_64	OK	77.3s
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r-release-windows-x86_64	OK	89s

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NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Qi Yan <qiy17@pitt.edu>’

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                    family = "Yan",
                    role = c("aut", "cre"),
                    email = "qiy17@pitt.edu")
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NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Qi Yan <qiy17@pitt.edu>’

No Authors@R field in DESCRIPTION.
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  Authors@R: person(given = "Qi",
                    family = "Yan",
                    role = c("aut", "cre"),
                    email = "qiy17@pitt.edu")
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NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Qi Yan <qiy17@pitt.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Qi",
                    family = "Yan",
                    role = c("aut", "cre"),
                    email = "qiy17@pitt.edu")
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Qi Yan <qiy17@pitt.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Qi",
                    family = "Yan",
                    role = c("aut", "cre"),
                    email = "qiy17@pitt.edu")
as necessary.

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Version History

new 1.0 Mar 10, 2026