NitrogenUptake2016

Data and Source Code From: Nitrogen Uptake and Allocation Estimates for Spartina Alterniflora and Distichlis Spicata

v0.2.3 · Oct 28, 2018 · GPL-3

Description

Contains data, code, and figures from Hill et al. 2018a (Journal of Experimental Marine Biology and Ecology; <DOI: 10.1016/j.jembe.2018.07.006>) and Hill et al. 2018b (Data In Brief <DOI: 10.1016/j.dib.2018.09.133>). Datasets document plant allometry, stem heights, nutrient and stable isotope content, and sediment denitrification enzyme assays. The data and analysis offer an examination of nitrogen uptake and allocation in two salt marsh plant species.

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2 NOTE

11 OK

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Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	39.6s
r-devel-linux-x86_64-debian-gcc	NOTE	31.2s
r-devel-linux-x86_64-fedora-clang	OK	60.3s
r-devel-linux-x86_64-fedora-gcc	OK	127.4s
r-devel-windows-x86_64	OK	60s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	70s
r-oldrel-windows-x86_64	OK	68s
r-patched-linux-x86_64	OK	34.6s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	26s
r-release-macos-x86_64	OK	156s
r-release-windows-x86_64	OK	60s

Check details (2 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
                      email = "hill.troy@gmail.com"),
               person(given = c("Nathalie", "R."),
                      family = "Sommer",
                      role = "aut"),
               person(given = c("Caroline", "R."),
                      family = "Kanaskie",
                      role = "aut"),
               person(given = c("Emily", "A."),
                      family = "Santos",
                      role = "aut"),
               person(given = c("Autumn", "J."),
                      family = "Oczkowski",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘CN_mass_data.Rd’:
    \keyword{data,}
    \keyword{isotopes,}
  File ‘allometry.Rd’:
    \keyword{data,}
  File ‘dea.Rd’:
    \keyword{data,}
    \keyword{denitrification,}
  File ‘stemHeights.Rd’:
    \keyword{NAPP,}
    \keyword{biomass,}
    \keyword{data,}
    \keyword{height,}

Found the following URLs which should use \doi (with the DOI name only):
  File ‘CN_mass_data.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘allometry.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘bCM.Rd’:
    https://doi.org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
                      email = "hill.troy@gmail.com"),
               person(given = c("Nathalie", "R."),
                      family = "Sommer",
                      role = "aut"),
               person(given = c("Caroline", "R."),
                      family = "Kanaskie",
                      role = "aut"),
               person(given = c("Emily", "A."),
                      family = "Santos",
                      role = "aut"),
               person(given = c("Autumn", "J."),
                      family = "Oczkowski",
                      role = "aut"))
as necessary.

Found the following \keyword or \concept entries
which likely give several index terms:
  File ‘CN_mass_data.Rd’:
    \keyword{data,}
    \keyword{isotopes,}
  File ‘allometry.Rd’:
    \keyword{data,}
  File ‘dea.Rd’:
    \keyword{data,}
    \keyword{denitrification,}
  File ‘stemHeights.Rd’:
    \keyword{NAPP,}
    \keyword{biomass,}
    \keyword{data,}
    \keyword{height,}

Found the following URLs which should use \doi (with the DOI name only):
  File ‘CN_mass_data.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘allometry.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘bCM.Rd’:
    https://doi.org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

Check History

NOTE 11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
       
...[truncated]...
org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
       
...[truncated]...
org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

ERROR 11 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
       
...[truncated]...
org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

ERROR r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
       
...[truncated]...
org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
       
...[truncated]...
org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Troy D. Hill <Hill.Troy@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Troy", "D."),
                      family = "Hill",
                      role = c("aut", "cre"),
       
...[truncated]...
org/10.1002/ecy.1600
  File ‘dea.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006
  File ‘stemHeights.Rd’:
    https://doi.org/10.1016/j.dib.2018.09.133
    https://doi.org/10.1016/j.jembe.2018.07.006

Code

Structure

Lines of code

4,549

Files

Compiled share

Has compiled src

Language breakdown

R 479 (10.5%)Docs 324 (7.1%)Vignettes 3,746 (82.3%)

API

Exported functions

Internal functions

Recent export changes

v0.2.0+5 ap, bCM, nappCalc2 +2 more

Testing & CI

Has tests

Test-to-code ratio

0.00

testthat edition

–

CI present

CI type

[]

PR gated

Docs

Return-value doc rate

100%

\dontrun example ratio

Roxygen coverage

100%

Has pkgdown

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

Dep constraint coverage

Secret pattern count

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.0

System requirements

–

C++ standard

–

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

First release

2018-07-30

Latest release

2018-10-28

Avg cadence

45 days

Cold removal rate

–

Dep drift

LOC over versions

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Version History

4 tracked

new 0.2.3 Mar 10, 2026

updated 0.2.3 ← 0.2.2 diff Oct 27, 2018

updated 0.2.2 ← 0.2.0 diff Sep 22, 2018

new 0.2.0 Jul 29, 2018