Description
Designed for association studies in nested association mapping (NAM) panels, experimental and random panels. The method is described by Xavier et al. (2015) <doi:10.1093/bioinformatics/btv448>. It includes tools for genome-wide associations of multiple populations, marker quality control, population genetics analysis, genome-wide prediction, solving mixed models and finding variance components through likelihood and Bayesian methods.
Downloads
418
Last 30 days
9038th
1.5K
Last 90 days
5.6K
Last year
Trend: -25.9% (30d vs prior 30d)
CRAN Check Status
6
NOTE
8
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (6 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
compiled code
File ‘NAM/libs/NAM.so’: Found non-API call to R: ‘R_UnboundValue’ Compiled code should not call non-API entry points in R. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, and section ‘Moving into C API compliance’ for issues with the use of non-API entry points.
NOTE
r-devel-linux-x86_64-debian-gcc
compiled code
File ‘NAM/libs/NAM.so’: Found non-API call to R: ‘R_UnboundValue’ Compiled code should not call non-API entry points in R. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, and section ‘Moving into C API compliance’ for issues with the use of non-API entry points.
NOTE
r-devel-windows-x86_64
compiled code
File 'NAM/libs/x64/NAM.dll': Found non-API call to R: 'R_UnboundValue' Compiled code should not call non-API entry points in R. See 'Writing portable packages' in the 'Writing R Extensions' manual, and section 'Moving into C API compliance' for issues with the use of non-API entry points.
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 7.0Mb
sub-directories of 1Mb or more:
libs 5.3Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 6.4Mb
sub-directories of 1Mb or more:
libs 4.7Mb
NOTE
r-patched-linux-x86_64
compiled code
File ‘NAM/libs/NAM.so’: Found non-API call to R: ‘R_UnboundValue’ Compiled code should not call non-API entry points in R. See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual, and section ‘Moving into C API compliance’ for issues with the use of non-API entry points.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 7.0Mb
sub-directories of 1Mb or more:
libs 5.3Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 6.4Mb
sub-directories of 1Mb or more:
libs 4.7Mb
Reverse Dependencies (2)
imports
suggests
Dependency Network
Version History
new
1.8.0
Mar 10, 2026