MixTwice
Large-Scale Hypothesis Testing by Variance Mixing
Description
Implements large-scale hypothesis testing by variance mixing. It takes two statistics per testing unit -- an estimated effect and its associated squared standard error -- and fits a nonparametric, shape-constrained mixture separately on two latent parameters. It reports local false discovery rates (lfdr) and local false sign rates (lfsr). Manuscript describing algorithm of MixTwice: Zheng et al(2021) <doi: 10.1093/bioinformatics/btab162>.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (4 non-OK)
CRAN incoming feasibility
Maintainer: ‘Zihao Zheng <zihao.zheng@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Zihao",
family = "Zheng",
role = c("aut", "cre"),
email = "zihao.zheng@wisc.edu"),
person(given = "Michael",
family = "A.Newton",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Zihao Zheng <zihao.zheng@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Zihao",
family = "Zheng",
role = c("aut", "cre"),
email = "zihao.zheng@wisc.edu"),
person(given = "Michael",
family = "A.Newton",
role = "aut"))
as necessary.
dependencies in R code
Namespaces in Imports field not imported from: ‘ashr’ ‘fdrtool’ All declared Imports should be used.
dependencies in R code
Namespaces in Imports field not imported from: ‘ashr’ ‘fdrtool’ All declared Imports should be used.
Check History
NOTE 10 OK · 4 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Zihao Zheng <zihao.zheng@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Zihao",
family = "Zheng",
role = c("aut", "cre"),
email = "zihao.zheng@wisc.edu"),
person(given = "Michael",
family = "A.Newton",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Zihao Zheng <zihao.zheng@wisc.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Zihao",
family = "Zheng",
role = c("aut", "cre"),
email = "zihao.zheng@wisc.edu"),
person(given = "Michael",
family = "A.Newton",
role = "aut"))
as necessary.
dependencies in R code
Namespaces in Imports field not imported from: ‘ashr’ ‘fdrtool’ All declared Imports should be used.
dependencies in R code
Namespaces in Imports field not imported from: ‘ashr’ ‘fdrtool’ All declared Imports should be used.