MicrobTiSDA

Microbiome Time-Series Data Analysis

v0.1.0 · Sep 22, 2025 · MIT + file LICENSE

Description

Provides tools specifically designed for analyzing longitudinal microbiome data. This tool integrates seven functional modules, providing a systematic framework for microbiome time-series analysis. For more details on inferences involving interspecies interactions see Fisher (2014) <doi:10.1371/journal.pone.0102451>. Details on this package are also described in an unpublished manuscript.

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CRAN Check Status

13 OK

Show all 13 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	604s
r-devel-linux-x86_64-debian-gcc	OK	398.1s
r-devel-linux-x86_64-fedora-clang	OK	1055.3s
r-devel-linux-x86_64-fedora-gcc	OK	967.1s
r-devel-windows-x86_64	OK	536s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	397s
r-oldrel-windows-x86_64	OK	750s
r-patched-linux-x86_64	OK	565.3s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	146s
r-release-macos-x86_64	OK	634s
r-release-windows-x86_64	OK	526s

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026

ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026

ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Packages required but not available: 'caret', 'ggraph', 'tidygraph'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 2, 2026

ERROR 11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 25, 2026

ERROR r-release-macos-x86_64

package dependencies

Package required but not available: ‘caret’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-oldrel-macos-arm64

installed package size

installed size is  6.7Mb
  sub-directories of 1Mb or more:
    data   4.6Mb
    help   1.6Mb

NOTE r-oldrel-macos-x86_64

installed package size

installed size is  6.7Mb
  sub-directories of 1Mb or more:
    data   4.6Mb
    help   1.6Mb

NOTE r-oldrel-windows-x86_64

installed package size

installed size is  5.8Mb
  sub-directories of 1Mb or more:
    data   3.7Mb
    help   1.7Mb

Dependency Network

Version History

1 tracked

new 0.1.0 Mar 10, 2026

R Observatory began tracking this package on Mar 10, 2026; it first appeared on CRAN Sep 22, 2025. Releases before tracking aren’t shown.