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MSCsimtester

Tests of Multispecies Coalescent Gene Tree Simulator Output

v1.1 · Jun 2, 2025 · MIT + file LICENSE

Description

Statistical tests for validating multispecies coalescent gene tree simulators, using pairwise distances and rooted triple counts. See Allman ES, Baños HD, Rhodes JA 2023. Testing multispecies coalescent simulators using summary statistics, IEEE/ACM Trans Comput Biol Bioinformat, 20(2):1613–1618. <doi:10.1109/TCBB.2022.3177956>.

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Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies ape Rdpack kSamples MSCsimtester

Version History

new 1.1 Mar 10, 2026
updated 1.1 ← 1.0.0 diff Jun 1, 2025
updated 1.0.0 ← 0.0.9 diff Dec 14, 2021
new 0.0.9 Nov 3, 2021