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MIC

Analysis of Antimicrobial Minimum Inhibitory Concentration Data

v2.0.0 · Dec 4, 2025 · GPL (>= 3)

Description

Analyse, plot, and tabulate antimicrobial minimum inhibitory concentration (MIC) data. Validate the results of an MIC experiment by comparing observed MIC values to a gold standard assay, in line with standards from the International Organization for Standardization (2021) <https://www.iso.org/standard/79377.html>.

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CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

examples

Running examples in ‘MIC-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: table
> ### Title: Table
> ### Aliases: table table.default table.mic_validation
> 
> ### ** Examples
> 
>
...[truncated]...
ithRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
as.sir_vectorised     4.902  0.259   6.324
subset.mic_validation 4.954  0.110   6.362
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies AMR glue dplyr stringr rlang ggh4x ggplot2 forcats purrr tibble MIC

Version History

5 tracked
new 2.0.0 Mar 10, 2026
updated 2.0.0 ← 1.2.0 diff Dec 3, 2025
updated 1.2.0 ← 1.1.0 diff Oct 11, 2025
updated 1.1.0 ← 1.0.2 diff Jun 4, 2025
new 1.0.2 Feb 6, 2025