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MIC

Analysis of Antimicrobial Minimum Inhibitory Concentration Data

v2.0.0 · Dec 4, 2025 · GPL (>= 3)

Description

Analyse, plot, and tabulate antimicrobial minimum inhibitory concentration (MIC) data. Validate the results of an MIC experiment by comparing observed MIC values to a gold standard assay, in line with standards from the International Organization for Standardization (2021) <https://www.iso.org/standard/79377.html>.

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CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

examples

Running examples in ‘MIC-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: table
> ### Title: Table
> ### Aliases: table table.default table.mic_validation
> 
> ### ** Examples
> 
>
...[truncated]...
ithRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
                       user system elapsed
as.sir_vectorised     4.902  0.259   6.324
subset.mic_validation 4.954  0.110   6.362
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Code metrics have not been computed for this package yet.

Dependency Network

Dependencies Reverse dependencies AMR glue dplyr stringr rlang ggh4x ggplot2 forcats purrr tibble MIC

Version History

5 tracked
new 2.0.0 Mar 10, 2026
updated 2.0.0 ← 1.2.0 diff Dec 3, 2025
updated 1.2.0 ← 1.1.0 diff Oct 11, 2025
updated 1.1.0 ← 1.0.2 diff Jun 4, 2025
new 1.0.2 Feb 6, 2025