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LDlinkR

Calculating Linkage Disequilibrium (LD) in Human Population Groups of Interest

v1.4.0 · Apr 10, 2024 · GPL (>= 2)

Description

Provides access to the 'LDlink' API (<https://ldlink.nih.gov/?tab=apiaccess>) using the R console. This programmatic access facilitates researchers who are interested in performing batch queries in 1000 Genomes Project (2015) <doi:10.1038/nature15393> data using 'LDlink'. 'LDlink' is an interactive and powerful suite of web-based tools for querying germline variants in human population groups of interest. For more details, please see Machiela et al. (2015) <doi:10.1093/bioinformatics/btv402>.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

imports

Dependency Network

Dependencies Reverse dependencies httr locuszoomr LDlinkR

Version History

new 1.4.0 Mar 10, 2026
updated 1.4.0 ← 1.3.0 diff Apr 9, 2024
updated 1.3.0 ← 1.2.3 diff May 30, 2023
updated 1.2.3 ← 1.2.2 diff Dec 14, 2022
updated 1.2.2 ← 1.2.1 diff Aug 7, 2022
updated 1.2.1 ← 1.2.0 diff Jun 6, 2022
updated 1.2.0 ← 1.1.2 diff May 10, 2022
updated 1.1.2 ← 1.1.1 diff Feb 18, 2021
updated 1.1.1 ← 1.0.2 diff Feb 1, 2021
updated 1.0.2 ← 1.0.1 diff Mar 1, 2020
updated 1.0.1 ← 1.0.0 diff Oct 16, 2019
new 1.0.0 Jul 31, 2019