HybridMicrobiomes
Analysis of Host-Associated Microbiomes from Hybrid Organisms
Description
A set of tools to analyze and visualize the relationships between host-associated microbiomes of hybrid organisms and those of their progenitor species. Though not necessary, installing the microViz package is recommended as a check for phyloseq objects. To install microViz from R Universe use the following command: install.packages("microViz", repos = c(davidbarnett = "https://david-barnett.r-universe.dev", getOption("repos"))). To install microViz from GitHub use the following commands: install.packages("devtools") followed by devtools::install_github("david-barnett/microViz").
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (3 non-OK)
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: 'microViz'
Check History
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 16, 2026
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: 'microViz'
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 12, 2026
package dependencies
Package required but not available: ‘phyloseq’ Package suggested but not available for checking: ‘microViz’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: 'microViz'
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 11, 2026
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: 'microViz'
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
package dependencies
Package required but not available: ‘phyloseq’ Package suggested but not available for checking: ‘microViz’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: ‘microViz’
package dependencies
Package suggested but not available for checking: 'microViz'