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HMP

Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP

v2.0.1 · Aug 31, 2019 · Apache License (== 2.0)
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Description

Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.

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r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
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r-release-windows-x86_64 OK
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NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Berkley Shands <rpackages@biorankings.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Patricio", "S."),
                      family = "La Rosa",
                      role = "aut"),
               person(given = "Elena",
                      family = "Deych",
                      role = "aut"),
               person(given = "Sharina",
                      family = "Carter",
                      role = "aut"),
               person(given = "Berkley",
                      family = "Shands",
                      role = c("aut", "cre"),
                      email = "rpackages@biorankings.com"),
               person(given = "Dake",
                      family = "Yang",
                      role = "aut"),
               person(given = c("William", "D."),
                      family = "Shannon",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Berkley Shands <rpackages@biorankings.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Patricio", "S."),
                      family = "La Rosa",
                      role = "aut"),
               person(given = "Elena",
                      family = "Deych",
                      role = "aut"),
               person(given = "Sharina",
                      family = "Carter",
                      role = "aut"),
               person(given = "Berkley",
                      family = "Shands",
                      role = c("aut", "cre"),
                      email = "rpackages@biorankings.com"),
               person(given = "Dake",
                      family = "Yang",
                      role = "aut"),
               person(given = c("William", "D."),
                      family = "Shannon",
                      role = "aut"))
as necessary.

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Berkley Shands <rpackages@biorankings.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Patricio", "S."),
                      family = "La Rosa",
                      role = "aut"),
 
...[truncated]...
         person(given = "Dake",
                      family = "Yang",
                      role = "aut"),
               person(given = c("William", "D."),
                      family = "Shannon",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Berkley Shands <rpackages@biorankings.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Patricio", "S."),
                      family = "La Rosa",
                      role = "aut"),
 
...[truncated]...
         person(given = "Dake",
                      family = "Yang",
                      role = "aut"),
               person(given = c("William", "D."),
                      family = "Shannon",
                      role = "aut"))
as necessary.

Reverse Dependencies (1)

imports

HMPTrees

Dependency Network

Dependencies Reverse dependencies dirmult ggplot2 foreach doParallel MASS vegan gplots rpart rpart.plot lattice HMPTrees HMP

Version History

new 2.0.1 Mar 10, 2026
updated 2.0.1 ← 2.0 diff Aug 30, 2019
updated 2.0 ← 1.6 diff Aug 25, 2019
updated 1.6 ← 1.5.1 diff Oct 30, 2018
updated 1.5.1 ← 1.5 diff Dec 20, 2017
updated 1.5 ← 1.4.3 diff Jul 5, 2017
updated 1.4.3 ← 1.4.2 diff Mar 3, 2016
updated 1.4.2 ← 1.3.1 diff Jan 14, 2016
updated 1.3.1 ← 1.3 diff May 8, 2013
updated 1.3 ← 1.1 diff Apr 12, 2013
updated 1.1 ← 1.0 diff Apr 24, 2012
new 1.0 Nov 3, 2011