Skip to content

HMC

High-Dimensional Mean Comparison with Projection and Cross-Fitting

v1.2 · May 2, 2025 · GPL-2

Description

Provides interpretable high-dimensional mean comparison methods (HMC). For example, users can apply these methods to assess the difference in gene expression between two treatment groups. It is not a gene-by-gene comparison. Instead, the methods focus on the interplay between features and identify those that are predictive of the group label. The tests are valid frequentist procedures and yield sparse estimates indicating which features contribute to the group differences.

Downloads

CRAN

512

Last 30 days

7120th

1.6K

Last 90 days

6.4K

Last year

Trend: -6.2% (30d vs prior 30d)

r2u CRAN

0

Last 30 days

24

Last 90 days

90

Last year

Trend: -100% (30d vs prior 30d)

autoCRAN

3

Last 7 days

12

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Code

Structure

Lines of code

3,053

Files

32

Compiled share

0%

Has compiled src

No

Language breakdown

R 2,201 (72.1%)Docs 852 (27.9%)

API

Exported functions

24

Internal functions

4

Recent export changes

v1.2+11 check_data_for_folds, check_non_null_and_identical_colnames, collect_active_features_proj +8 more
v1.0+13 anchored_lasso_testing, debiased_pc_testing, estimate_nuisance_parameter_lasso +10 more

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

27.3%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL-2

License flags

SPDX valid, OSI approved

History

Versions

3

First release

2024-03-09

Latest release

2025-05-02

Avg cadence

210 days

Cold removal rate

Dep drift

1

LOC over versions

v1.0: 2,019 LOCv1.1: 2,043 LOCv1.2: 3,053 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies glmnet irlba PMA MASS grpreg HMC

Version History

4 tracked
new 1.2 Mar 10, 2026
updated 1.2 ← 1.1 diff May 1, 2025
updated 1.1 ← 1.0 diff Aug 16, 2024
new 1.0 Mar 8, 2024