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GenoTriplo

Genotyping Triploids (or Diploids) from Luminescence Data

v1.1.3 · Mar 25, 2025 · GPL

Description

Genotyping of triploid individuals from luminescence data (marker probeset A and B). Works also for diploids. Two main functions: Run_Clustering() that regroups individuals with a same genotype based on proximity and Run_Genotyping() that assigns a genotype to each cluster. For Shiny interface use: launch_GenoShiny().

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CRAN Check Status

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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Additional Issues

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Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies shinyBS cowplot doParallel dplyr DT foreach ggplot2 htmltools processx rlang Rmixmod shiny shinythemes tidyr GenoTriplo

Version History

new 1.1.3 Mar 10, 2026
updated 1.1.3 ← 1.1.2 diff Mar 24, 2025
updated 1.1.2 ← 1.1.0 diff Dec 3, 2024
updated 1.1.0 ← 1.0.4 diff Jul 30, 2024
updated 1.0.4 ← 1.0.3 diff Feb 27, 2024
updated 1.0.3 ← 1.0.2 diff Oct 2, 2023
updated 1.0.2 ← 1.0.1 diff Sep 5, 2023
new 1.0.1 Jun 29, 2023