GenWin
Spline Based Window Boundaries for Genomic Analyses
Description
Defines window or bin boundaries for the analysis of genomic data. Boundaries are based on the inflection points of a cubic smoothing spline fitted to the raw data. Along with defining boundaries, a technique to evaluate results obtained from unequally-sized windows is provided. Applications are particularly pertinent for, though not limited to, genome scans for selection based on variability between populations (e.g. using Wright's fixations index, Fst, which measures variability in subpopulations relative to the total population).
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
CRAN incoming feasibility
Maintainer: ‘Timothy M. Beissinger <timbeissinger@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Timothy", "M."),
family = "Beissinger",
role = c("aut", "cre"),
email = "timbeissinger@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Timothy M. Beissinger <timbeissinger@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Timothy", "M."),
family = "Beissinger",
role = c("aut", "cre"),
email = "timbeissinger@gmail.com")
as necessary.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Timothy M. Beissinger <timbeissinger@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Timothy", "M."),
family = "Beissinger",
role = c("aut", "cre"),
email = "timbeissinger@gmail.com")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Timothy M. Beissinger <timbeissinger@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Timothy", "M."),
family = "Beissinger",
role = c("aut", "cre"),
email = "timbeissinger@gmail.com")
as necessary.