FDRestimation
Estimate, Plot, and Summarize False Discovery Rates
v1.0.1
·
Apr 1, 2022
·
MIT + file LICENSE
Description
The user can directly compute and display false discovery rates from inputted p-values or z-scores under a variety of assumptions. p.fdr() computes FDRs, adjusted p-values and decision reject vectors from inputted p-values or z-values. get.pi0() estimates the proportion of data that are truly null. plot.p.fdr() plots the FDRs, adjusted p-values, and the raw p-values points against their rejection threshold lines.
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NOTE
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | NOTE |
| r-release-macos-x86_64 | NOTE |
| r-release-windows-x86_64 | NOTE |
Check details (14 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
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r-devel-linux-x86_64-debian-gcc
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checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
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r-devel-linux-x86_64-fedora-clang
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checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
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r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
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r-patched-linux-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
Check History
NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-devel-linux-x86_64-debian-gcc
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-devel-linux-x86_64-fedora-clang
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-devel-linux-x86_64-fedora-gcc
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-devel-macos-arm64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-devel-windows-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-patched-linux-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-linux-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-macos-arm64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-macos-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-release-windows-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-oldrel-macos-arm64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-oldrel-macos-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^
NOTE
r-oldrel-windows-x86_64
Rd files
checkRd: (-1) p.fdr.Rd:30: Lost braces
30 | \item{adjust.method}{A string used to identify the p-value and false discovery rate adjustment method. Defaults to \code{BH}. Options are \code{BH}, \code{BY}, code{Bon},\code{Holm}, \code{Hoch}, and \code{Sidak}.}
| ^