EHR

Electronic Health Record (EHR) Data Processing and Analysis Tool

v0.4-11 · Dec 19, 2022 · GPL (>= 3)

Description

Process and analyze electronic health record (EHR) data. The 'EHR' package provides modules to perform diverse medication-related studies using data from EHR databases. Especially, the package includes modules to perform pharmacokinetic/pharmacodynamic (PK/PD) analyses using EHRs, as outlined in Choi, Beck, McNeer, Weeks, Williams, James, Niu, Abou-Khalil, Birdwell, Roden, Stein, Bejan, Denny, and Van Driest (2020) <doi:10.1002/cpt.1787>. Additional modules will be added in future. In addition, this package provides various functions useful to perform Phenome Wide Association Study (PheWAS) to explore associations between drug exposure and phenotypes obtained from EHR data, as outlined in Choi, Carroll, Beck, Mosley, Roden, Denny, and Van Driest (2018) <doi:10.1093/bioinformatics/bty306>.

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CRAN Check Status

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13 NOTE

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	252.5s
r-devel-linux-x86_64-debian-gcc	NOTE	196.7s
r-devel-linux-x86_64-fedora-clang	NOTE	383.8s
r-devel-linux-x86_64-fedora-gcc	NOTE	397.7s
r-devel-macos-arm64	NOTE	77s
r-devel-windows-x86_64	NOTE	347s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	204s
r-oldrel-windows-x86_64	ERROR	451s
r-patched-linux-x86_64	NOTE	244.7s
r-release-linux-x86_64	NOTE	241.6s
r-release-macos-arm64	NOTE
r-release-macos-x86_64	NOTE	392s
r-release-windows-x86_64	NOTE	347s

Check details (15 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

ERROR r-oldrel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'ehr_vignette_01_mxr.Rmd' using rmarkdown
! Package pdftex.def Error: File `529ab8705f3ba29db742996b963445a6b47fad43.pdf'
 not found: using draft setting.

Error: processing vignette 'ehr_vignette_01_mxr.Rmd' failed with diagnostics:
LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/EHR.Rcheck/vign_test/EHR/vignettes/ehr_vignette_01_mxr.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See ehr_vignette_01_mxr.log for more info.
--- failed re-building 'ehr_vignette_01_mxr.Rmd'

--- re-building 'ehr_vignette_02_str.Rmd' using rmarkdown
--- finished re-building 'ehr_vignette_02_str.Rmd'

--- re-building 'ehr_vignette_03_DoseBuilding.Rmd' using rmarkdown
--- finished re-building 'ehr_vignette_03_DoseBuilding.Rmd'

--- re-building 'ehr_vignette_04_Build_PK_Oral.Rmd' using rmarkdown
--- finished re-building 'ehr_vignette_04_Build_PK_Oral.Rmd'

SUMMARY: processing the following file failed:
  'ehr_vignette_01_mxr.Rmd'

Error: Vignette re-building failed.
Execution halted

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicate flow data
       |     ^
checkRd: (-1) mod-internal.Rd:21: Lost braces
    21 | code{findMedFlowRow_mod}: find row numbers for matching ID and time
       |     ^
checkRd: (-1) mod-internal.Rd:23: Lost braces
    23 | code{flowData_mod}: correct flow data
       |     ^
checkRd: (-1) mod-internal.Rd:25: Lost braces
    25 | code{concData_mod}: correct concentration data
       |     ^
checkRd: (-1) mod-internal.Rd:27: Lost braces
    27 | code{infusionData_mod}: combine flow and MAR data; standardize hourly rate,
       |     ^
checkRd: (-1) mod-internal.Rd:30: Lost braces
    30 | code{resolveDoseDups_mod}: correct duplicated infusion and bolus doses
       |     ^
checkRd: (-1) mod-internal.Rd:32: Lost braces
    32 | code{writeCheckDat
...[truncated]...
rence (in minutes) of time vector
       |     ^
checkRd: (-1) pk-internal.Rd:28: Lost braces
    28 | code{fixDates}: add leading zeroes to date
       |     ^
checkRd: (-1) pk-internal.Rd:30: Lost braces
    30 | code{joinFlowMar}: rbind two data sets
       |     ^
checkRd: (-1) pk-internal.Rd:32: Lost braces
    32 | code{updateInterval_mod}: replace maxint with difference between surgery time
       |     ^
checkRd: (-1) pk-internal.Rd:35: Lost braces
    35 | code{fix_serum_time}: create time variable
       |     ^
checkRd: (-1) pk-internal.Rd:37: Lost braces
    37 | code{merge_by_time}: impute in x by closest time in y
       |     ^
checkRd: (-1) pk-internal.Rd:39: Lost braces
    39 | code{merge_inf_bolus}: combine infusion and bolus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

Check History

ERROR 0 OK · 13 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026

NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

ERROR r-oldrel-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) build_lastdose.Rd:10: Lost braces
    10 | code{build_lastdose}: build PK oral with lastdose information
       |     ^
checkRd: (-1) mod-internal.Rd:18: Lost braces
    18 | code{colflow_mod}: build a comparison of potentially duplicat
...[truncated]...
olus into one hourly dose file
       |     ^
checkRd: (-1) pk-internal.Rd:41: Lost braces
    41 | code{addZeroDose}: add rows of zero dose, after a gap
       |     ^
checkRd: (-1) pk-internal.Rd:43: Lost braces
    43 | code{pkdata}
       |     ^

Dependency Network

Version History

new 0.4-11 Mar 10, 2026

updated 0.4-11 ← 0.4-10 diff Dec 18, 2022

updated 0.4-10 ← 0.4-8 diff Oct 10, 2022

updated 0.4-8 ← 0.4-5 diff Jun 20, 2022

updated 0.4-5 ← 0.4-4 diff Apr 5, 2022

updated 0.4-4 ← 0.4-1 diff Oct 6, 2021

updated 0.4-1 ← 0.4-0 diff Jun 8, 2021

updated 0.4-0 ← 0.3-1 diff Jun 4, 2021

updated 0.3-1 ← 0.3-0 diff Oct 7, 2020

updated 0.3-0 ← 0.1-3 diff Sep 11, 2020

new 0.1-3 Oct 19, 2017

Maintainer

Leena Choi

Dependencies

Depends

R (>= 2.10)

Imports

stats utils data.table methods lubridate pkdata

Suggests

glmnet logistf medExtractR (>= 0.4.1) knitr rmarkdown ggplot2 markdown

Compilation

No compilation needed

First Published

Oct 19, 2017

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CRAN Checks

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