DiPALM
Differential Pattern Analysis via Linear Modeling
v1.2
·
Jun 27, 2022
·
GPL (>= 2)
Description
Individual gene expression patterns are encoded into a series of eigenvector patterns ('WGCNA' package). Using the framework of linear model-based differential expression comparisons ('limma' package), time-course expression patterns for genes in different conditions are compared and analyzed for significant pattern changes. For reference, see: Greenham K, Sartor RC, Zorich S, Lou P, Mockler TC and McClung CR. eLife. 2020 Sep 30;9(4). <doi:10.7554/eLife.58993>.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
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r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Ryan C. Sartor <sartorry@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Ryan", "C."),
family = "Sartor",
role = c("aut", "cre"),
email = "sartorry@gmail.com"),
person(given = "Kathleen",
family = "Greenham",
role = "aut",
email = "greenham@umn.edu"))
as necessary.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Ryan C. Sartor <sartorry@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Ryan", "C."),
family = "Sartor",
role = c("aut", "cre"),
email = "sartorry@gmail.com"),
person(given = "Kathleen",
family = "Greenham",
role = "aut",
email = "greenham@umn.edu"))
as necessary.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Ryan C. Sartor <sartorry@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Ryan", "C."),
family = "Sartor",
role = c("aut", "cre"),
...[truncated]...
athleen",
family = "Greenham",
role = "aut",
email = "greenham@umn.edu"))
as necessary.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Ryan C. Sartor <sartorry@gmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Ryan", "C."),
family = "Sartor",
role = c("aut", "cre"),
...[truncated]...
athleen",
family = "Greenham",
role = "aut",
email = "greenham@umn.edu"))
as necessary.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.