DDPNA
Disease-Drived Differential Proteins Co-Expression Network Analysis
Description
Functions designed to connect disease-related differential proteins and co-expression network. It provides the basic statics analysis included t test, ANOVA analysis. The network construction is not offered by the package, you can used 'WGCNA' package which you can learn in Peter et al. (2008) <doi:10.1186/1471-2105-9-559>. It also provides module analysis included PCA analysis, two enrichment analysis, Planner maximally filtered graph extraction and hub analysis.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | WARNING |
| r-devel-linux-x86_64-debian-gcc | WARNING |
| r-devel-linux-x86_64-fedora-clang | WARNING |
| r-devel-linux-x86_64-fedora-gcc | WARNING |
| r-devel-macos-arm64 | WARNING |
| r-devel-windows-x86_64 | WARNING |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | WARNING |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (7 non-OK)
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
dependencies in R code
Missing or unexported object: 'Biostrings::pairwiseAlignment'
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
Check History
WARNING 11 OK · 0 NOTE · 3 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’
dependencies in R code
Missing or unexported object: ‘Biostrings::pairwiseAlignment’