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CytoProfile

Cytokine Profiling Analysis Tool

v0.2.4 · Feb 27, 2026 · GPL (>= 2)

Description

Provides comprehensive cytokine profiling analysis through quality control using biologically meaningful cutoffs on raw cytokine measurements and by testing for distributional symmetry to recommend appropriate transformations. Offers exploratory data analysis with summary statistics, enhanced boxplots, and barplots, along with univariate and multivariate analytical capabilities for in-depth cytokine profiling such as Principal Component Analysis based on Andrzej Maćkiewicz and Waldemar Ratajczak (1993) <doi:10.1016/0098-3004(93)90090-R>, Sparse Partial Least Squares Discriminant Analysis based on Lê Cao K-A, Boitard S, and Besse P (2011) <doi:10.1186/1471-2105-12-253>, Random Forest based on Breiman, L. (2001) <doi:10.1023/A:1010933404324>, and Extreme Gradient Boosting based on Tianqi Chen and Carlos Guestrin (2016) <doi:10.1145/2939672.2939785>.

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CRAN Check Status

14 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies mixOmics dplyr tidyr pROC plot3D caret xgboost randomForest pheatmap e1071 ggplot2 ggrepel gridExtra reshape2 lifecycle +1 more dependencies CytoProfile

Version History

new 0.2.4 Mar 10, 2026
updated 0.2.4 ← 0.2.3 diff Feb 26, 2026
updated 0.2.3 ← 0.2.2 diff Dec 5, 2025
updated 0.2.2 ← 0.2.1 diff Sep 3, 2025
updated 0.2.1 ← 0.2.0 diff May 18, 2025
updated 0.2.0 ← 0.1.2 diff Apr 10, 2025
new 0.1.2 Apr 2, 2025