CongreveLamsdell2016
Distance Metrics for Trees Generated by Congreve and Lamsdell
v1.0.3
·
Feb 23, 2024
·
GPL (>= 2)
Description
Includes the 100 datasets simulated by Congreve and Lamsdell (2016) <doi:10.1111/pala.12236>, and analyses of the partition and quartet distance of reconstructed trees from the generative tree, as analysed by Smith (2019) <doi:10.1098/rsbl.2018.0632>.
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| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | ERROR |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (1 non-OK)
ERROR
r-oldrel-windows-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'Compare-methods.Rmd' using rmarkdown ! Package pdftex.def Error: File `2745c4f86a636a6aa62b3c1488bb1530261237a4.pdf' not found: using draft setting. Error: processing vignette 'Compare-methods.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/CongreveLamsdell2016.Rcheck/vign_test/CongreveLamsdell2016/vignettes/Compare-methods.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See Compare-methods.log for more info. --- failed re-building 'Compare-methods.Rmd' --- re-building 'Compare-node-supports.Rmd' using rmarkdown ! Package pdftex.def Error: File `8362126ec372b3a18ced7397d143631dd6136514.pdf' not found: using draft setting. Error: processing vignette 'Compare-node-supports.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/CongreveLamsdell2016.Rcheck/vign_test/CongreveLamsdell2016/vignettes/Compare-node-supports.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See Compare-node-supports.log for more info. --- failed re-building 'Compare-node-supports.Rmd' --- re-building 'Conduct-analyses.Rmd' using rmarkdown --- finished re-building 'Conduct-analyses.Rmd' SUMMARY: processing the following files failed: 'Compare-methods.Rmd' 'Compare-node-supports.Rmd' Error: Vignette re-building failed. Execution halted
Check History
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026
ERROR
r-oldrel-windows-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'Compare-methods.Rmd' using rmarkdown ! Package pdftex.def Error: File `2745c4f86a636a6aa62b3c1488bb1530261237a4.pdf' not found: using draft setting. Error: processing vignette 'Compare-methods.Rmd ...[truncated]... building 'Conduct-analyses.Rmd' using rmarkdown --- finished re-building 'Conduct-analyses.Rmd' SUMMARY: processing the following files failed: 'Compare-methods.Rmd' 'Compare-node-supports.Rmd' Error: Vignette re-building failed. Execution halted
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 11, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
ERROR
r-devel-linux-x86_64-debian-gcc
re-building of vignette outputs
Error(s) in re-building vignettes: ... --- re-building ‘Compare-methods.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building 'Compare-methods.Rmd' --- re-building ‘Compare-node-s ...[truncated]... ING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘Conduct-analyses.Rmd’ SUMMARY: processing the following file failed: ‘Compare-node-supports.Rmd’ Error: Vignette re-building failed. Execution halted