Skip to content

CellDEEP

Cell DiffErential Expression by Pooling ('CellDEEP')

v1.0.1 · Mar 29, 2026 · GPL (>= 3)

Description

Pool cells together before running differentially expression (DE) analysis. Tell 'CellDEEP' how many cells you want to pool together (which shall be determined by the overall cell number of data), then run DE analysis. Cheng et al. (2026) <doi:10.64898/2026.03.09.710522>.

Downloads

83

Last 30 days

23555th

83

Last 90 days

83

Last year

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 7 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 30, 2026

Dependency Network

Dependencies Reverse dependencies Seurat CellDEEP

Version History

new 1.0.1 Mar 29, 2026