Skip to content

CRABS

Congruent Rate Analyses in Birth-Death Scenarios

v1.2.0 · Oct 24, 2023 · GPL-3

Description

Features tools for exploring congruent phylogenetic birth-death models. It can construct the pulled speciation- and net-diversification rates from a reference model. Given alternative speciation- or extinction rates, it can construct new models that are congruent with the reference model. Functionality is included to sample new rate functions, and to visualize the distribution of one congruence class. See also Louca & Pennell (2020) <doi:10.1038/s41586-020-2176-1>.

Downloads

CRAN

253

Last 30 days

16720th

702

Last 90 days

2.7K

Last year

Trend: +33.9% (30d vs prior 30d)

r2u CRAN

9

Last 30 days

27

Last 90 days

129

Last year

Trend: -43.8% (30d vs prior 30d)

CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies ggplot2 magrittr deSolve dplyr tibble colorspace patchwork latex2exp tidyr pracma ape CRABS

Version History

3 tracked
new 1.2.0 Mar 10, 2026
updated 1.2.0 ← 1.1.0 diff Oct 23, 2023
new 1.1.0 Jun 19, 2022