CNVScope

A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization

v3.7.2 · Mar 30, 2022 · BSD_3_clause + file LICENSE

Description

Provides the ability to create interaction maps, discover CNV map domains (edges), gene annotate interactions, and create interactive visualizations of these CNV interaction maps.

Downloads

264

Last 30 days

16351st

922

Last 90 days

3.8K

Last year

Trend: -34% (30d vs prior 30d)

CRAN Check Status

7 NOTE

7 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	730.1s
r-devel-linux-x86_64-debian-gcc	NOTE	548.4s
r-devel-linux-x86_64-fedora-clang	NOTE	1313s
r-devel-linux-x86_64-fedora-gcc	NOTE	1318.8s
r-devel-macos-arm64	OK	188s
r-devel-windows-x86_64	OK	661s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	516s
r-oldrel-windows-x86_64	NOTE	874s
r-patched-linux-x86_64	OK	709.7s
r-release-linux-x86_64	OK	704.2s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	810s
r-release-windows-x86_64	OK	656s

Check details (9 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘James Dalgleish <james.dalgleish@nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Dalgeish",
                      role = "aut"),
               person(given = "Yonghong",
                      family = "Wang",
                      role = "aut"),
               person(given = "Jack",
                      family = "Zhu",
                      role = "aut"),
               person(given = "Paul",
                      family = "Meltzer",
                      role = "aut"),
               person(given = "James",
                      family = "Dalgleish",
                      role = "cre",
                      email = "james.dalgleish@nih.gov"))
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘James Dalgleish <james.dalgleish@nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Dalgeish",
                      role = "aut"),
               person(given = "Yonghong",
                      family = "Wang",
                      role = "aut"),
               person(given = "Jack",
                      family = "Zhu",
                      role = "aut"),
               person(given = "Paul",
                      family = "Meltzer",
                      role = "aut"),
               person(given = "James",
                      family = "Dalgleish",
                      role = "cre",
                      email = "james.dalgleish@nih.gov"))
as necessary.

NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: 'Hmisc'
  All declared Imports should be used.

NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: 'Hmisc'
  All declared Imports should be used.

NOTE r-oldrel-macos-arm64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    doc       3.2Mb
    extdata   1.7Mb

NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘BSgenome.Hsapiens.UCSC.hg19’

NOTE r-oldrel-macos-x86_64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    doc       3.2Mb
    extdata   1.7Mb

NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘BSgenome.Hsapiens.UCSC.hg19’

NOTE r-oldrel-windows-x86_64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    doc       3.2Mb
    extdata   1.7Mb

Check History

NOTE 7 OK · 7 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘James Dalgleish <james.dalgleish@nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Dalgeish",
                      role = "aut"),
             
...[truncated]...
   family = "Meltzer",
                      role = "aut"),
               person(given = "James",
                      family = "Dalgleish",
                      role = "cre",
                      email = "james.dalgleish@nih.gov"))
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘James Dalgleish <james.dalgleish@nih.gov>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "James",
                      family = "Dalgeish",
                      role = "aut"),
             
...[truncated]...
   family = "Meltzer",
                      role = "aut"),
               person(given = "James",
                      family = "Dalgleish",
                      role = "cre",
                      email = "james.dalgleish@nih.gov"))
as necessary.

NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: 'Hmisc'
  All declared Imports should be used.

NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: 'Hmisc'
  All declared Imports should be used.

NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘BSgenome.Hsapiens.UCSC.hg19’

NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘BSgenome.Hsapiens.UCSC.hg19’

NOTE r-oldrel-windows-x86_64

installed package size

installed size is  5.2Mb
  sub-directories of 1Mb or more:
    doc       3.2Mb
    extdata   1.7Mb

Dependency Network

Version History

new 3.7.2 Mar 10, 2026

updated 3.7.2 ← 3.6.0 diff Mar 30, 2022

updated 3.6.0 ← 3.5.6 diff May 23, 2021

updated 3.5.6 ← 3.3.9 diff Jan 10, 2021

updated 3.3.9 ← 3.3.7 diff Dec 14, 2020

updated 3.3.7 ← 3.1.8 diff Nov 28, 2020

updated 3.1.8 ← 3.0.9 diff Jul 2, 2020

updated 3.0.9 ← 3.0.8 diff Apr 28, 2020

updated 3.0.8 ← 3.0.6 diff Apr 27, 2020

updated 3.0.6 ← 3.0.5 diff Apr 26, 2020

updated 3.0.5 ← 2.9.4 diff Apr 21, 2020

updated 2.9.4 ← 2.9.2 diff Dec 6, 2019

updated 2.9.2 ← 2.8.2 diff Dec 4, 2019

updated 2.8.2 ← 2.8.1 diff Oct 24, 2019

updated 2.8.1 ← 2.7.7 diff Oct 23, 2019

updated 2.7.7 ← 2.7.2.5 diff Oct 13, 2019

updated 2.7.2.5 ← 2.7.0 diff Sep 21, 2019

updated 2.7.0 ← 1.9.7 diff Jul 23, 2019

new 1.9.7 Oct 19, 2018