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BoneDensityMapping

Maps Bone Densities from CT Scans to Surface Models

v0.1.4 · Oct 8, 2025 · MIT + file LICENSE

Description

Allows local bone density estimates to be derived from CT data and mapped to 3D bone models in a reproducible manner. Processing can be performed at the individual bone or group level. Also includes tools for visualizing the bone density estimates. Example methods are described in Telfer et al., (2021) <doi:10.1002/jor.24792>, Telfer et al., (2021) <doi:10.1016/j.jse.2021.05.011>.

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OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 22, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 20, 2026
ERROR r-devel-linux-x86_64-debian-gcc

re-building of vignette outputs

Error(s) in re-building vignettes:
  ...
--- re-building ‘example-workflow-vignette.Rmd’ using rmarkdown
Error: Reason: Scan download failed

Quitting from example-workflow-vignette.Rmd:34-76 [unnamed-chunk-2]
Execution halted
OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 12, 2026
ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘ggpubr’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 16, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 15, 2026
ERROR r-oldrel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'example-workflow-vignette.Rmd' using rmarkdown
Error: Reason: Scan download failed

Quitting from example-workflow-vignette.Rmd:132-187 [unnamed-chunk-12]
Execution halted
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 10, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 9, 2026
ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘geometry’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies cowplot ggplot2 ggpubr oro.nifti ptinpoly rdist rjson concaveman geometry sp rgl RNifti Rvcg FNN nat BoneDensityMapping

Version History

5 tracked
new 0.1.4 Mar 10, 2026
updated 0.1.4 ← 0.1.3 diff Oct 7, 2025
updated 0.1.3 ← 0.1.2 diff Aug 25, 2025
updated 0.1.2 ← 0.1.1 diff Jul 27, 2025
new 0.1.1 Jul 24, 2025