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AUtests

Approximate Unconditional and Permutation Tests

v0.99 · Sep 3, 2020 · GPL-2

Description

Performs approximate unconditional and permutation testing for 2x2 contingency tables. Motivated by testing for disease association with rare genetic variants in case-control studies. When variants are extremely rare, these tests give better control of Type I error than standard tests.

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CRAN Check Status

2 NOTE
11 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (2 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.

Check History

NOTE 11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
ERROR 11 OK · 1 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
ERROR r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
NOTE 11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 2, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
ERROR 9 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 25, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
ERROR r-release-macos-x86_64

package dependencies

Package required but not available: ‘logistf’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Arjun Sondhi <asondhi@uw.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Arjun",
                      family = "Sondhi",
                      role = c("aut", "cre"),
                      email = "asondhi@uw.edu"),
               person(given = "Ken",
                      family = "Rice",
                      role = "aut"))
as necessary.

Dependency Network

Dependencies Reverse dependencies logistf AUtests

Version History

4 tracked
new 0.99 Mar 10, 2026
updated 0.99 ← 0.98 diff Sep 3, 2020
updated 0.98 ← 0.97 diff Jun 11, 2016
new 0.97 Mar 30, 2016