Description
Analyses of frequencies can be performed using an alternative test based on the G statistic. The test has similar type-I error rates and power as the chi-square test. However, it is based on a total statistic that can be decomposed in an additive fashion into interaction effects, main effects, simple effects, contrast effects, etc., mimicking precisely the logic of ANOVA. We call this set of tools 'ANOFA' (Analysis of Frequency data) to highlight its similarities with ANOVA. This framework also renders plots of frequencies along with confidence intervals. Finally, effect sizes and planning statistical power are easily done under this framework. The ANOFA is a tool that assesses the significance of effects instead of the significance of parameters; as such, it is more intuitive to most researchers than alternative approaches based on generalized linear models. See Laurencelle and Cousineau (2023) <doi:10.20982/tqmp.19.2.p173>.
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CRAN Check Status
11
NOTE
3
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | NOTE |
| r-devel-linux-x86_64-fedora-gcc | NOTE |
| r-devel-macos-arm64 | NOTE |
| r-devel-windows-x86_64 | NOTE |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | NOTE |
| r-release-linux-x86_64 | NOTE |
| r-release-macos-arm64 | NOTE |
| r-release-macos-x86_64 | NOTE |
| r-release-windows-x86_64 | NOTE |
Check details (11 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-debian-gcc
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-fedora-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-fedora-gcc
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'
NOTE
r-patched-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'
Check History
NOTE 3 OK · 11 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 12, 2026
NOTE
r-devel-linux-x86_64-debian-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-debian-gcc
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-fedora-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-fedora-gcc
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'
NOTE
r-patched-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'
ERROR 3 OK · 10 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 11, 2026
NOTE
r-devel-linux-x86_64-debian-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-debian-gcc
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-fedora-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
ERROR
r-devel-linux-x86_64-fedora-gcc
whether package can be installed
Installation failed. See ‘/data/gannet/ripley/R/packages/tests-devel/ANOFA.Rcheck/00install.out’ for details.
NOTE
r-devel-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'
NOTE
r-patched-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'
NOTE 3 OK · 11 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-debian-gcc
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-fedora-clang
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-linux-x86_64-fedora-gcc
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-devel-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'
NOTE
r-patched-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-linux-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-arm64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-macos-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘ANOFA-contrastFrequencies.R’ ‘ANOFA-emFrequencies.R’
NOTE
r-release-windows-x86_64
DESCRIPTION meta-information
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
'ANOFA-contrastFrequencies.R' 'ANOFA-emFrequencies.R'