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ALLSPICER

0.1.9

ALLelic Spectrum of Pleiotropy Informed Correlated Effects

0packages depend
2.9Kdownloads / year
test coverage
13/13checks pass

Overview

About
Maintained by Wenhan LuFirst published 2024-10-161 releasesCRAN page ↗

Provides statistical tools to analyze heterogeneous effects of rare variants within genes that are associated with multiple traits. The package implements methods for assessing pleiotropic effects and identifying allelic heterogeneity, which can be useful in large-scale genetic studies. Methods include likelihood-based statistical tests to assess these effects. For more details, see Lu et al. (2024) <doi:10.1101/2024.10.01.614806>.

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Health

CRAN checks
13OK
Code health
None
Tests · ratio 0.00
not tracked
Coverage
100%
Documentation · exports
None
Vignettes
Yes
README
5
Dependencies · direct
Check history
  • OK2026-03-13
    14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
  • WARNING2026-03-12
    13 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
  • OK2026-03-10
    14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

2.9K
CRAN downloads in the past year
Rank #17,934 · ~8/day · ~245/mo
23730 days
65190 days
2.9K1 year
Also on174 r2u32 autocran
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Repository stars, issues, and contributor activity are not tracked yet.

Dependencies

Declared dependencies
7 external dependencies (excludes base and recommended)
Depends (0)
none
LinkingTo (0)
none
Enhances (0)
none
Reverse dependencies
0direct
indirect (not tracked)

Nothing depends on this yet.

Code

767Lines of code
13Exported functions

Line coverage

Expression

Tests / Examples

Functions

13 13 exported

Complexity

1.5 avg / 3 max

Call network

13 nodes / 12 edges

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Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (1)
Maintainer (1)
Author, Maintainer
Release timeline

1 releases. Pick two to compare their code metrics; R releases are shown for context.

  • R
    R 4.6.0 released · 2026-04-24
  • 0.1.9Latest
    2026-03-10 · current release

Package metadata

First published
2024-10-16
Total releases
1 / 2 yrs
License
MIT + file LICENSE OSI
Download size
not tracked yet
Installed size
not tracked yet
With dependencies
not tracked yet