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SeqSQC

Bioc current

A bioconductor package for sample quality check with next generation sequencing data

v1.34.0 · software · GPL-3
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Release Lineage

Entered 3.6 · Oct 31, 2017

Current · Requires R 4.6

1.0 In 18 of 49 releases 3.23

Description

The SeqSQC is designed to identify problematic samples in NGS data, including samples with gender mismatch, contamination, cryptic relatedness, and population outlier.

Code

Code metrics have not been computed for this package yet.

Topics

Experiment Data
ExperimentData › OrganismData › Homo_sapiens_Data
Sequencing Data
ExperimentData › RepositoryData › Project1000genomes
ExperimentData › SpecimenSource › Genome

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