Aerith
Bioc currentvisualization and annotation of isotopic enrichment patterns of peptides and metabolites with stable isotope labeling from proteomics and metabolomics
Release Lineage
Entered 3.23 · Apr 29, 2026
Current · Requires R 4.6
Description
Visualisation of peptide isotopic peaks and SIP peptide spectra match (PSM). Filtration of high quality PSM. Accurate isotopic abundance calculation of peptide and metabolites. Visualisation of SIP proteomics results.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
529 85 exported
Complexity
1.6 avg / 19 max
Call network
529 nodes / 156 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
20,062
Files
198
Compiled share
61.2%
Has compiled src
Yes
Language breakdown
API
Exported functions
85
Internal functions
10
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.08
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
8
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.4.0
System requirements
1
C++ standard
C++17
License
GPL-3
License flags
SPDX valid, OSI approved
History
Versions
1
First release
2026-05-01
Latest release
2026-05-01
Avg cadence
–
Cold removal rate
–
Dep drift
0
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 99%
- Return-value docs
- 100%
- References docs
- 0%
Topics
People
- Yi Xiong author maintainer
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("Aerith")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.