Packages
12 packages on Bioconductor tagged SingleCell or Proteomics or DNAMethylation, most distinct IPs first
SingleCell, Proteomics and DNAMethylation in Topics
| Package | Maintainer | Category | Latest version | Distinct IPs a month | Needs |
|---|---|---|---|---|---|
| limma Linear Models for Microarray and Omics DataGordon Smyth | Gordon Smyth | software | 10 Aug 2026 | 45,965 | 6 |
| IlluminaHumanMethylation450kmanifest Annotation for Illumina's 450k methylation arraysKasper Daniel Hansen | Kasper Daniel Hansen | annotation | no date on record | 1,773 | 144 |
| FDb.InfiniumMethylation.hg19 Annotation package for Illumina Infinium DNA methylation probesTim Triche, Jr. | Tim Triche, Jr. | annotation | no date on record | 1,483 | 77 |
| IlluminaHumanMethylationEPICmanifest Manifest for Illumina's EPIC methylation arraysKasper Daniel Hansen | Kasper Daniel Hansen | annotation | no date on record | 1,449 | 144 |
| RankProd Rank Product method for identifying differentially expressed genes with application in meta-analysisFrancesco Del Carratore | Francesco Del Carratore | software | 28 Apr 2026 | 1,142 | 6 |
| plgem Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM)Norman Pavelka | Norman Pavelka | software | 28 Apr 2026 | 1,047 | 9 |
| PROcess Ciphergen SELDI-TOF ProcessingXiaochun Li | Xiaochun Li | software | 28 Apr 2026 | 893 | 11 |
| ScISI In Silico Interactome | no date on record | 572 | |||
| ppiStats Protein-Protein Interaction Statistical Package | no date on record | 540 | |||
| IlluminaHumanMethylation27k.db Illumina Illumina Human Methylation 27k annotation data (chip IlluminaHumanMethylation27k)Tim Triche, Jr. | Tim Triche, Jr. | annotation | no date on record | 276 | 43 |
| FDb.InfiniumMethylation.hg18 Annotation package for Illumina Infinium DNA methylation probesTim Triche, Jr. | Tim Triche, Jr. | annotation | no date on record | 232 | 77 |
| IlluminaHumanMethylation27kmanifest Annotation for Illumina's 27k methylation arraysKasper Daniel Hansen | Kasper Daniel Hansen | annotation | no date on record | 191 | 144 |