blit
Bioinformatics Library for Integrated Tools
v0.2.0
·
Mar 29, 2025
·
GPL (>= 3)
Description
An all-encompassing R toolkit designed to streamline the process of calling various bioinformatics software and then performing data analysis and visualization in R. With 'blit', users can easily integrate a wide array of bioinformatics command line tools into their workflows, leveraging the power of R for sophisticated data manipulation and graphical representation.
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CRAN Check Status
2
ERROR
11
OK
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | ERROR |
| r-devel-linux-x86_64-fedora-gcc | ERROR |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
ERROR
r-devel-linux-x86_64-fedora-clang
examples
Running examples in ‘blit-Ex.R’ failed
The error most likely occurred in:
> ### Name: appmamba
> ### Title: Manage Environment with 'micromamba'
> ### Aliases: appmamba install_appmamba uninstall_appmamba appmamba_rc
>
> ### ** Examples
>
> install_appmamba()
appmamba is already installed
> appmamba()
Error in `appmamba()`:
! Invalid installation of appmamba
ℹ Please reinstall appmamba with `install_appmamba(force = TRUE)`
Backtrace:
▆
1. └─blit::appmamba()
2. └─cli::cli_abort(...)
3. └─rlang::abort(...)
Execution halted
ERROR
r-devel-linux-x86_64-fedora-gcc
examples
Running examples in ‘blit-Ex.R’ failed
The error most likely occurred in:
> ### Name: appmamba
> ### Title: Manage Environment with 'micromamba'
> ### Aliases: appmamba install_appmamba uninstall_appmamba appmamba_rc
>
> ### ** Examples
>
> install_appmamba()
appmamba is already installed
> appmamba()
Error in `appmamba()`:
! Invalid installation of appmamba
ℹ Please reinstall appmamba with `install_appmamba(force = TRUE)`
Backtrace:
▆
1. └─blit::appmamba()
2. └─cli::cli_abort(...)
3. └─rlang::abort(...)
Execution halted
Check History
ERROR 11 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE Jun 16, 2026
ERROR
r-devel-linux-x86_64-fedora-clang
examples
Running examples in ‘blit-Ex.R’ failed
The error most likely occurred in:
> ### Name: appmamba
> ### Title: Manage Environment with 'micromamba'
> ### Aliases: appmamba install_appmamba uninstall_appmamba appmamba_rc
>
> ### ** Examples
>
> instal
...[truncated]...
> appmamba()
Error in `appmamba()`:
! Invalid installation of appmamba
ℹ Please reinstall appmamba with `install_appmamba(force = TRUE)`
Backtrace:
▆
1. └─blit::appmamba()
2. └─cli::cli_abort(...)
3. └─rlang::abort(...)
Execution halted
ERROR
r-devel-linux-x86_64-fedora-gcc
examples
Running examples in ‘blit-Ex.R’ failed
The error most likely occurred in:
> ### Name: appmamba
> ### Title: Manage Environment with 'micromamba'
> ### Aliases: appmamba install_appmamba uninstall_appmamba appmamba_rc
>
> ### ** Examples
>
> instal
...[truncated]...
> appmamba()
Error in `appmamba()`:
! Invalid installation of appmamba
ℹ Please reinstall appmamba with `install_appmamba(force = TRUE)`
Backtrace:
▆
1. └─blit::appmamba()
2. └─cli::cli_abort(...)
3. └─rlang::abort(...)
Execution halted