R Observatory: Metrics for OrgMassSpecR version 0.5-4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

OrgMassSpecR

0.5-4

Organic Mass Spectrometry

0packages depend

7.2Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Nathan DodderFirst published 2010-09-0910 releasesCRAN page ↗

Organic/biological mass spectrometry data analysis.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("OrgMassSpecR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-orgmassspecr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-OrgMassSpecR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-OrgMassSpecR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.2 min · r-oldrel-macos-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

1

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 96%
Return-value docs: 95%
References docs: 35%

Downloads

7.2K

CRAN downloads in the past year

Rank #7,833 · ~20/day · ~600/mo

Releases R versions

Daily download trend is not available in this view yet.

32230 days

1.2K90 days

7.2K1 year

Compare downloads with other packages →

Also on145 r2u17 autocran1.3K conda_forge76 c2d4u

Repository

GitHub ↗ orgmassspec/orgmassspec.github.io

1Stars

0Forks

0Open issues

0Open PRs

0Releases

74Commits

4Contributors

74 commits · Last activity 2026-01-26

Stars over time

2025-04-11 · 12026-07-07 · 1

Repository practices

Upstream repositoryBeta

Checks run against github.com/orgmassspec/orgmassspec.github.io on 2026-08-09.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

2 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.0.0grid

Imports (0)

none

LinkingTo (0)

none

Suggests (3)

latticeknitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (2)

Maintainer (1)

Nathan Dodder

Maintainer, Author, Copyright holder · added in 0.4-6

Authors (1)

Nathan Dodder

Maintainer, Author, Copyright holder · added in 0.4-6

Contributors (1)

Katharine Mullen

Contributor · added in 0.4-6

Copyright holders (1)

Nathan Dodder

Maintainer, Author, Copyright holder · added in 0.4-6

Listed in earlier versions (4)

Nathan G. Dodder

no longer listed · 0.2-2 to 0.4-4

Southern California Coastal Water Research Project (SCCWRP). Contributions from Katharine M. Mullen.

no longer listed · 0.2-2

Nathan G. Dodder. Code contributions from Katharine M. Mullen.

no longer listed · 0.3-5

with code contributions from Katharine M. Mullen.

no longer listed · 0.3-12 to 0.4-4

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.5-4Latest
2026-01-27 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
0.5-3
2017-08-13 · diff ↗
0.5-2
2017-08-12 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.4-6
2016-10-19 · diff ↗
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16

Show 13 earlier events

0.4-4
2014-05-23 · diff ↗
R
R 3.1.0 released · 2014-04-10
0.4-3
2014-03-30 · diff ↗
0.4
2013-10-06 · diff ↗
R
R 3.0.0 released · 2013-04-03
0.3-12
2012-05-17 · diff ↗
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
0.3-5
2011-08-26 · diff ↗
R
R 2.13.0 released · 2011-04-13
R
R 2.12.0 released · 2010-10-15
0.2-2
2010-09-09
R
R 2.11.0 released · 2010-04-22

Package metadata

First published: 2010-09-09
Total releases: 10 / 16 yrs
License: BSD_2_clause + file LICENSE OSI
Minimum R: ≥ 4.0.0
Bundled data: 11 KB / 7 files
Download size: 383 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Chemometrics and Computational Physics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("OrgMassSpecR")

Format

Dodder, N., & Mullen, K. (2026). OrgMassSpecR: Organic Mass Spectrometry (Version 0.5-4) [Computer software]. https://doi.org/10.32614/CRAN.package.OrgMassSpecR

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for OrgMassSpecR version 0.5-4 [Data set]. HJJB, LLC. Data release v2026-08-13. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-13, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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