Packages pages: Packages, [Assess](/assess.md), [Advisories](/advisories.md), [Licence library](/licences.md), [Checks](/checks.md), [Archived](/archived.md) # Packages Search: "letter:N" The search reads these keywords as filters. Other words are searched as written. - `license:MIT`: the licence family, by its name or an old keyword such as GPL - `downloads:>1000`: at least that many distinct IPs a month - `view:Bayesian`: a biocViews term, up to three - `category:software`: a Bioconductor category: software, annotation, experiment or workflows - `maintainer:"Hadley Wickham"`: the packages a person maintains now. Alone, with no catalogue in the address, their page - `owner:tidyverse`: packages developed in that GitHub account's repositories. Alone, with no catalogue in the address, its page - `ai:claude`: packages whose repository shows signs of that AI coding tool, ai:any of any tool - `ai-found:pr`: how a tool was found: file, ignore, pr or commits - `ai-model:opus`: a model named in the credit lines of commits - `repo:yes`: a source repository on record, or repo:no - `since:2026-01-01`: the latest release on or after that day - `letter:D`: names that start with that letter - `release:3.22`: the packages of a Bioconductor release, or release:all for every package ever seen - `status:removed`: Bioconductor packages removed after an earlier release, status:unreleased never in one - `-checks:failing`: a minus before checks, license, view, maintainer, owner, ai, ai-model, letter, tests or category leaves those packages out, and before compiled, deadline or repo gives the other answer - `in:bioc`: a catalogue: all, cran, bioc, archived, or datasets for Datasets' search - `sort:downloads`: an order: name, downloads, updated, or relevance for words alone Catalogue: Bioconductor. - First letter: N 63 packages on Bioconductor, most distinct IPs first. To search, add ?q=WORDS. To pick a catalogue, add catalogue=all, catalogue=cran or catalogue=bioc. To order the list, add sort=name, category, published, downloads, dependencies and order=asc or order=desc. Filters for Bioconductor: status (In the current release or not), release (Bioconductor release), category (Category), view (biocViews term), min_downloads (Distinct IPs a month), letter (First letter), license (Licence family offered), repository (Source repository on GitHub known), published_since (Latest version published on or after), maintainer (Maintainer), owner (Repository owner on GitHub), ai (AI coding tool), ai_found (AI tool found as), ai_model (Model named in commits). view takes up to three terms joined by commas, and lists packages tagged with any of them. min_downloads takes any whole number. maintainer takes a person's whole name and owner a GitHub login. ai takes any or a tool's key, ai_found file, ignore, pr or commits, and ai_model a model family's key, with the values and counts the page offers. not_ before the name of letter, license, check, task_view, tests, maintainer, owner, ai, ai_model, category or view leaves those packages out, as in not_check=problems. | Package | Maintainer | Category | Latest version | Distinct IPs a month (sorted, high to low) | Needs | | --- | --- | --- | --- | ---: | ---: | | [NTW](/bioc/NTW.md) Predict gene network using an Ordinary Differential Equation (ODE) based method | Yuanhua Liu | software | 28 Apr 2026 | 683 | 3 | | [nipalsMCIA](/bioc/nipalsMCIA.md) Multiple Co-Inertia Analysis via the NIPALS Method | Maximilian Mattessich | software | 28 Apr 2026 | 680 | 87 | | [NBAMSeq](/bioc/NBAMSeq.md) Negative Binomial Additive Model for RNA-Seq Data | Xu Ren | software | 28 Apr 2026 | 675 | 84 | | [nuCpos](/bioc/nuCpos.md) An R package for prediction of nucleosome positions | Hiroaki Kato | software | 28 Apr 2026 | 658 | 2 | | [NewWave](/bioc/NewWave.md) Negative binomial model for scRNA-seq | Federico Agostinis | software | 10 Aug 2026 | 647 | 44 | | [ndexr](/bioc/ndexr.md) NDEx R client library | Florian Auer | software | 28 Apr 2026 | 622 | 40 | | [nempi](/bioc/nempi.md) Inferring unobserved perturbations from gene expression data | Martin Pirkl | software | 28 Apr 2026 | 607 | 109 | | [NetActivity](/bioc/NetActivity.md) Compute gene set scores from a deep learning framework | Carlos Ruiz-Arenas | software | 28 Apr 2026 | 600 | 59 | | [netboost](/bioc/netboost.md) Network Analysis Supported by Boosting | Pascal Schlosser | software | 28 Apr 2026 | 561 | 82 | | [netprioR](/bioc/netprioR.md) A model for network-based prioritisation of genes | Fabian Schmich | software | 30 Oct 2025 | 551 | 42 | | [NCIgraph](/bioc/NCIgraph.md) Pathways from the NCI Pathways Database | Laurent Jacob | software | 28 Apr 2026 | 536 | 57 | | [nearBynding](/bioc/nearBynding.md) Discern RNA structure proximal to protein binding | Veronica Busa | software | 4 Nov 2025 | 514 | 105 | | [notame](/bioc/notame.md) Workflow for non-targeted LC-MS metabolic profiling | Vilhelm Suksi | software | 28 Apr 2026 | 461 | 65 | | [notameViz](/bioc/notameViz.md) Workflow for non-targeted LC-MS metabolic profiling | Vilhelm Suksi | software | 28 Apr 2026 | 419 | 82 | | [Neve2006](/bioc/Neve2006.md) expression and CGH data on breast cancer cell lines | VJ Carey | experiment | 5 May 2026 | 398 | 47 | | [notameStats](/bioc/notameStats.md) Workflow for non-targeted LC-MS metabolic profiling | Vilhelm Suksi | software | 28 Apr 2026 | 377 | 68 | | [NCIgraphData](/bioc/NCIgraphData.md) Data for the NCIgraph software package | Laurent Jacob | experiment | 5 May 2026 | 373 | 0 | | [NestLink](/bioc/NestLink.md) NestLink an R data package to guide through Engineered Peptide Barcodes for In-Depth Analyzes of Binding Protein Ensembles | Lennart Opitz | experiment | 5 May 2026 | 325 | 105 | | [netZooR](/bioc/netZooR.md) A menagerie of methods for the inference and analysis of gene regulatory networks | Marouen Ben Guebila | software | no date on record | 318 | | | [Norway981.db](/bioc/Norway981.db.md) Norway981 http://genome-www5.stanford.edu/ Annotation Data (Norway981) | Bioconductor Package Maintainer | annotation | no date on record | 315 | 43 | | [nugohs1a520180.db](/bioc/nugohs1a520180.db.md) Affymetrix nugohs1a520180 annotation data (chip nugohs1a520180) | Philip de Groot | annotation | no date on record | 273 | 43 | | [NxtIRFdata](/bioc/NxtIRFdata.md) Data for NxtIRF | Alex Chit Hei Wong | experiment | 5 May 2026 | 265 | 98 | | [nugomm1a520177probe](/bioc/nugomm1a520177probe.md) Probe sequence data for microarrays of type nugomm1a520177 | Philip de Groot | annotation | no date on record | 260 | 42 | | [NanoporeRNASeq](/bioc/NanoporeRNASeq.md) Nanopore RNA-Seq Example data | Ying Chen | experiment | 5 May 2026 | 257 | 64 | | [nugomm1a520177.db](/bioc/nugomm1a520177.db.md) Affymetrix nugomm1a520177 annotation data (chip nugomm1a520177) | Philip de Groot | annotation | no date on record | 252 | 43 | | [nugohs1a520180probe](/bioc/nugohs1a520180probe.md) Probe sequence data for microarrays of type nugohs1a520180 | Philip de Groot | annotation | no date on record | 249 | 42 | | [nullrangesData](/bioc/nullrangesData.md) ExperimentHub datasets for the nullranges package | Michael Love | experiment | 5 May 2026 | 244 | 77 | | [nugohs1a520180cdf](/bioc/nugohs1a520180cdf.md) nugohs1a520180cdf | Philip de Groot | annotation | no date on record | 236 | 42 | | [NetActivityData](/bioc/NetActivityData.md) Data required for getting the gene set scores with NetActivity package | Carlos Ruiz-Arenas | experiment | 5 May 2026 | 233 | 0 | | [nanotubes](/bioc/nanotubes.md) Mouse nanotube CAGE data | Malte Thodberg | experiment | 5 May 2026 | 230 | 0 | This page lists 31 to 60 of 63 packages. [Previous](/packages.md?catalogue=bioc&letter=N&sort=downloads) [Next](/packages.md?catalogue=bioc&letter=N&sort=downloads&page=3) --- R Observatory is independent of the R Project, CRAN and Bioconductor. The same page for people is at /packages?catalogue=bioc&letter=N&page=2, and every address is listed at /llms.txt.