About
Method, About Method The datasets inside packages are read from their R objects in datasets
data/ folders when the code is analysed. Each object is described by its class, its shape and its columns, and fingerprinted so the same data can be found in other packages.data() are listed, 76,136 on CRAN and 8,045 on Bioconductor, so the list is not every file in data/.
- Class
- data.frame
- Kind
- table
- File
inst/extdata/PSR_Probes.txt- In version
- 3.23
Columns
probe_idinteger1,5616,884,904- Lowest
- 1,561
- Lower quartile
- 1,936,573
- Median
- 3,620,259
- Mean
- 3,600,097
- Upper quartile
- 5,256,944
- Highest
- 6,884,904
- Standard deviation
- 1,988,647
- Skewness
- -0.041
- Distinct
- 282
probe_xinteger12663- Lowest
- 1
- Lower quartile
- 588.3
- Median
- 1291
- Mean
- 1322
- Upper quartile
- 1948
- Highest
- 2663
- Standard deviation
- 772.6
- Skewness
- 0.05
- Distinct
- 261
probe_yinteger02568- Lowest
- 0
- Lower quartile
- 722
- Median
- 1351
- Mean
- 1343
- Upper quartile
- 1961
- Highest
- 2568
- Standard deviation
- 742
- Zeros
- 1
- Skewness
- -0.041
- Distinct
- 263
transcript_cluster_idscharacteralways 13 characters- Shortest
- 13 characters
- Longest
- 13 characters
- Distinct
- 1
probeset_idinteger19,558,06319,558,091- Lowest
- 19,558,063
- Lower quartile
- 19,558,070
- Median
- 19,558,077
- Mean
- 19,558,077
- Upper quartile
- 19,558,084
- Highest
- 19,558,091
- Standard deviation
- 8.326
- Skewness
- -0.053
- Distinct
- 29
probeset_namecharacteralways 16 characters- Shortest
- 16 characters
- Longest
- 16 characters
- Distinct
- 29
probe_sequencecharacteralways 25 characters- Shortest
- 25 characters
- Longest
- 25 characters
- Distinct
- 282
seqnamecharacteralways 5 characters- Shortest
- 5 characters
- Longest
- 5 characters
- Distinct
- 1
startinteger34,931,88834,961,235- Lowest
- 34,931,888
- Lower quartile
- 34,950,523
- Median
- 34,951,895
- Mean
- 34,952,516
- Upper quartile
- 34,957,008
- Highest
- 34,961,235
- Standard deviation
- 6,841
- Outliers
- 20 low
- Skewness
- -1.5
- Distinct
- 282
stopinteger34,931,91234,961,259- Lowest
- 34,931,912
- Lower quartile
- 34,950,547
- Median
- 34,951,919
- Mean
- 34,952,540
- Upper quartile
- 34,957,032
- Highest
- 34,961,259
- Standard deviation
- 6,841
- Outliers
- 20 low
- Skewness
- -1.5
- Distinct
- 282
strandcharacteralways 1 character- Shortest
- 1 character
- Longest
- 1 character
- Distinct
- 1